SoS program |
| A tool for mapping sequence variability onto protein structures (SNPs onto Structures) |
| SoS is written in the Perl language and it has been designed for Linux and Unix OS |
| ==> SoS.tar.gz Installation |
PyMOL plugins(for Linux only) |
| Warning ! These plugins are beta versions |
| @ | ProSAT plugin : ProSAT_linux_plugin installer |
| ProSAT (Protein Structure Annotation Tool) is a tool to map SwissProt features and Prosite patterns on to a 3D structure of a protein. | |
| History of the ProSAT plugin: history | |
| @ | CASTp plugin : CASTp_linux plugin FOR PyMOL 0.98 |
| CASTp provides identification and measurements of surface accessible pockets as well as interior inaccessible cavities, for proteins and other molecules. | |
| GPSSpyMOL plugin : GPSSpyMOL linux plugin FOR PyMOL >= 0.98 | |
| @ | ConSurf plugin : ConSurf_linux_plugin installer |
| ConSurf-HSSP provides pre-calculated evolutionary rates of the amino acid sites, based on HSSP alignment of homologous proteins and the Rate4Site algorithm. | |
| History of the ConSurf plugin: history | |
| CASTp.pyc file must be downloaded in $PYMOL_HOME/modules/pmg_tk/startup/ and remove the former one |